Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm29272-201ENSMUST00000185476 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21919-201ENSMUST00000185653 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28446-201ENSMUST00000186508 694 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28680-201ENSMUST00000186743 480 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21824-201ENSMUST00000186810 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21862-201ENSMUST00000186957 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21796-201ENSMUST00000187116 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21795-201ENSMUST00000187263 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28814-201ENSMUST00000187334 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21720-201ENSMUST00000187428 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20827-201ENSMUST00000187928 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21766-201ENSMUST00000187962 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21837-201ENSMUST00000188117 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21829-201ENSMUST00000188787 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21892-201ENSMUST00000189182 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21777-201ENSMUST00000189307 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28247-201ENSMUST00000189329 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28350-201ENSMUST00000189453 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21906-201ENSMUST00000189760 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm29411-201ENSMUST00000189889 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21717-201ENSMUST00000189902 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21765-201ENSMUST00000189913 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21895-201ENSMUST00000189997 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21734-201ENSMUST00000190346 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21902-201ENSMUST00000190361 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm29029-201ENSMUST00000190520 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21898-201ENSMUST00000190727 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm29300-201ENSMUST00000190738 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20793-201ENSMUST00000190779 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28879-201ENSMUST00000190973 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21752-201ENSMUST00000191023 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm28841-201ENSMUST00000191284 695 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21813-201ENSMUST00000191291 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21878-201ENSMUST00000191365 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21855-201ENSMUST00000191596 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20833-201ENSMUST00000192708 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21907-201ENSMUST00000192989 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20928-201ENSMUST00000192992 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20851-201ENSMUST00000193038 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm37476-201ENSMUST00000193046 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21678-201ENSMUST00000193567 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21768-201ENSMUST00000194103 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm20836-201ENSMUST00000194582 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm37688-201ENSMUST00000195195 465 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm21660-201ENSMUST00000195789 696 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm44420-201ENSMUST00000203669 490 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 AC154669.1-201ENSMUST00000224405 482 ntBASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a3E9PWQ3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Mir675-201ENSMUST00000102320 84 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm14571-201ENSMUST00000118292 570 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm16480-201ENSMUST00000120439 832 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm8707-201ENSMUST00000183325 980 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm28746-201ENSMUST00000187453 380 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a3E9PWQ3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms