Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm29396-201ENSMUST00000185659 716 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Gm7399-201ENSMUST00000032395 858 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Gm9899-201ENSMUST00000065519 555 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm28043E0CXC2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm28043E0CXC2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm13297-201ENSMUST00000120205 934 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm27023-201ENSMUST00000182372 285 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm27501-201ENSMUST00000183599 107 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm18304-201ENSMUST00000189162 546 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Gm6007-201ENSMUST00000208170 823 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Morn2-202ENSMUST00000227729 656 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms