Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Capsl-202ENSMUST00000226688 739 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Gm44190-201ENSMUST00000205083 1401 ntBASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hfm1D3Z4R1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Gng5-ps-201ENSMUST00000120931 205 ntBASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Gm43249-201ENSMUST00000200464 458 ntBASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 AC115304.2-201ENSMUST00000226399 332 ntBASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hfm1D3Z4R1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hfm1D3Z4R1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hfm1D3Z4R1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hfm1D3Z4R1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Hfm1D3Z4R1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hfm1D3Z4R1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm6158-201ENSMUST00000109467 904 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm8111-201ENSMUST00000117659 987 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm6630-201ENSMUST00000119199 454 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm8255-201ENSMUST00000218693 305 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm14005-210ENSMUST00000225087 1413 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm14071-201ENSMUST00000117817 509 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm6548-201ENSMUST00000167498 1165 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hfm1D3Z4R1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms