Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm23912-201ENSMUST00000104687 87 ntBASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm11618-201ENSMUST00000117946 267 ntBASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm6152-201ENSMUST00000151704 340 ntBASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm25911-201ENSMUST00000157621 56 ntBASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ccnb1ip1D3Z3K2 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.71□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Snord83b-201ENSMUST00000104546 94 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11964-201ENSMUST00000120982 444 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm27430-201ENSMUST00000184585 107 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm44333-201ENSMUST00000197168 107 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccnb1ip1D3Z3K2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms