Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm13022-201ENSMUST00000121181 285 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm18201-201ENSMUST00000174735 875 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm4654-201ENSMUST00000183305 982 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mir6407-201ENSMUST00000184510 101 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm5298-201ENSMUST00000201122 892 ntBASIC10.69□□□□□ -0.7
Shank1D3YZU1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Shank1D3YZU1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm14274-201ENSMUST00000117182 615 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm13549-201ENSMUST00000118339 796 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm14942-201ENSMUST00000119642 336 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm38151-201ENSMUST00000195085 289 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shank1D3YZU1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms