Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm14165-201ENSMUST00000121456 952 ntBASIC9.57□□□□□ -0.88
Chd6A3KFM7 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Gm8255-201ENSMUST00000218693 305 ntBASIC9.57□□□□□ -0.88
Chd6A3KFM7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Chd6A3KFM7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.57□□□□□ -0.88
Chd6A3KFM7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.57□□□□□ -0.88
Chd6A3KFM7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm27440-201ENSMUST00000184785 107 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm40332-201ENSMUST00000199847 938 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm44658-201ENSMUST00000207965 637 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm38348-201ENSMUST00000191718 2273 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm8873-201ENSMUST00000217847 1439 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm44958-201ENSMUST00000203734 736 ntBASIC9.56□□□□□ -0.88
Chd6A3KFM7 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Chd6A3KFM7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm44917-201ENSMUST00000208798 520 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms