Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm15352-201ENSMUST00000118696 270 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm21092-201ENSMUST00000178995 955 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Mir8093-201ENSMUST00000185043 137 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Gm6722-201ENSMUST00000221586 390 ntBASIC12.42□□□□□ -0.42
Scn1aA2APX8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn1aA2APX8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gm24891-201ENSMUST00000104391 136 ntBASIC12.41□□□□□ -0.42
Scn1aA2APX8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gm11956-201ENSMUST00000119525 512 ntBASIC12.41□□□□□ -0.42
Scn1aA2APX8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.41□□□□□ -0.42
Scn1aA2APX8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.41□□□□□ -0.42
Scn1aA2APX8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1aA2APX8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm7666-201ENSMUST00000146631 819 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Mir3547-201ENSMUST00000175461 88 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm8459-201ENSMUST00000162504 760 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.4□□□□□ -0.42
Scn1aA2APX8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1aA2APX8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn1aA2APX8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms