Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Mospd4-201ENSMUST00000180618 576 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm28882-201ENSMUST00000185504 314 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav5-4A0A075B652 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm23912-201ENSMUST00000104687 87 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm25043-201ENSMUST00000158604 212 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm38002-201ENSMUST00000193255 180 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm38158-201ENSMUST00000194617 339 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Btrc-209ENSMUST00000224478 2194 ntBASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav5-4A0A075B652 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav5-4A0A075B652 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav5-4A0A075B652 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms