Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm37246-201ENSMUST00000192665 835 ntBASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Gm45770-201ENSMUST00000212105 616 ntBASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lhx9Q9WUH2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx9Q9WUH2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx9Q9WUH2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx9Q9WUH2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lhx9Q9WUH2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm15131-201ENSMUST00000119124 595 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm13461-201ENSMUST00000120980 662 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm8343-201ENSMUST00000182705 994 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm5733-201ENSMUST00000190232 939 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm6905-201ENSMUST00000205729 511 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lhx9Q9WUH2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm26286-201ENSMUST00000104166 134 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Gm12857-201ENSMUST00000117678 592 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lhx9Q9WUH2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms