Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ClcnkaQ9WUB7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.02□□□□□ -0.64
ClcnkaQ9WUB7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm14644-201ENSMUST00000116671 647 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm13350-201ENSMUST00000120519 479 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm7584-201ENSMUST00000175829 940 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm9230-201ENSMUST00000188228 532 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClcnkaQ9WUB7 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms