Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Gm38241-201ENSMUST00000192641 898 ntBASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Gm31256-201ENSMUST00000194705 506 ntBASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sec61a2Q9JLR1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm14726-201ENSMUST00000120623 896 ntBASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm6082-201ENSMUST00000215204 454 ntBASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sec61a2Q9JLR1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm26083-201ENSMUST00000157904 193 ntBASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm20482-202ENSMUST00000174729 825 ntBASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sec61a2Q9JLR1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms