Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm7940-201ENSMUST00000218195 769 ntBASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube3bQ9ES34 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm11783-201ENSMUST00000119549 885 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm15566-201ENSMUST00000121130 590 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm10051-201ENSMUST00000145209 414 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Mir7686-201ENSMUST00000200604 57 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm3786-201ENSMUST00000202659 378 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube3bQ9ES34 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm14193-201ENSMUST00000105067 153 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm7666-201ENSMUST00000146631 819 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm22902-201ENSMUST00000158488 302 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm29499-201ENSMUST00000189151 486 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm28329-201ENSMUST00000191208 689 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm29171-201ENSMUST00000191397 486 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm5982-201ENSMUST00000196234 512 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm45113-201ENSMUST00000207518 165 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 AC140209.1-201ENSMUST00000227875 284 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms