Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmg20aQ9DC33 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm16202-201ENSMUST00000117532 544 ntBASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm15920-201ENSMUST00000118998 402 ntBASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm12036-201ENSMUST00000120008 530 ntBASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmg20aQ9DC33 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.85□□□□□ -0.67
Hmg20aQ9DC33 Gm28631-201ENSMUST00000190740 334 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms