Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm12928-201ENSMUST00000117115 573 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm38092-201ENSMUST00000195600 653 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm8598-201ENSMUST00000221184 836 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Sf3a3Q9D554 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm8522-201ENSMUST00000118416 1929 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm12363-201ENSMUST00000122250 668 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Mir8102-201ENSMUST00000184148 139 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Mir7654-201ENSMUST00000185082 70 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm38671-201ENSMUST00000200573 130 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm32025-201ENSMUST00000217960 307 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Dhrs4-202ENSMUST00000226168 828 ntBASIC12□□□□□ -0.49
Sf3a3Q9D554 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sf3a3Q9D554 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sf3a3Q9D554 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sf3a3Q9D554 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3a3Q9D554 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sf3a3Q9D554 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sf3a3Q9D554 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sf3a3Q9D554 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms