Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm25890-201ENSMUST00000177643 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm22614-201ENSMUST00000178300 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx56Q9D0R4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm6114-201ENSMUST00000182472 968 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm6082-201ENSMUST00000215204 454 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx56Q9D0R4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.53□□□□□ -0.4
Ddx56Q9D0R4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms