Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssr1Q9CY50 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm13226-201ENSMUST00000117838 404 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm14999-201ENSMUST00000121039 624 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm37008-201ENSMUST00000195712 319 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Snora73a-201ENSMUST00000082453 205 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.01□□□□□ -0.33
Ssr1Q9CY50 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ssr1Q9CY50 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm6023-201ENSMUST00000118217 606 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm13342-201ENSMUST00000121055 207 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm23119-201ENSMUST00000158610 140 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13□□□□□ -0.33
Ssr1Q9CY50 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm37201-201ENSMUST00000191845 523 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13□□□□□ -0.33
Ssr1Q9CY50 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13□□□□□ -0.33
Ssr1Q9CY50 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Gm10829-201ENSMUST00000202084 2988 ntBASIC13□□□□□ -0.33
Ssr1Q9CY50 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13□□□□□ -0.33
Ssr1Q9CY50 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ssr1Q9CY50 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ssr1Q9CY50 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms