Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm28937-201ENSMUST00000185413 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm29400-201ENSMUST00000187208 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm28662-201ENSMUST00000188446 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm28251-201ENSMUST00000188835 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm37318-201ENSMUST00000194325 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm38017-201ENSMUST00000194768 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm37287-201ENSMUST00000195449 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm37793-201ENSMUST00000195548 695 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm43380-201ENSMUST00000200421 220 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm6423-201ENSMUST00000204315 934 ntBASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cldnd1Q9CQX5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm11619-201ENSMUST00000117474 237 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm11578-201ENSMUST00000118530 459 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm7741-201ENSMUST00000181445 989 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm28833-201ENSMUST00000189671 559 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm7082-201ENSMUST00000209880 969 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldnd1Q9CQX5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Mir671-201ENSMUST00000102432 98 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm14213-201ENSMUST00000119778 768 ntBASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldnd1Q9CQX5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms