Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm24548-201ENSMUST00000158650 108 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm27023-201ENSMUST00000182372 285 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm3890-201ENSMUST00000182416 207 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm44958-201ENSMUST00000203734 736 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm12314-201ENSMUST00000118104 538 ntBASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm14660-201ENSMUST00000119809 575 ntBASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm18187-201ENSMUST00000196476 984 ntBASIC11.28□□□□□ -0.6
Ska1Q9CPV1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska1Q9CPV1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska1Q9CPV1 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms