Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim34aQ99PP6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm11675-201ENSMUST00000121873 832 ntBASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim34aQ99PP6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm37981-201ENSMUST00000194280 535 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Map1b-203ENSMUST00000223725 2669 ntBASIC14.67□□□□□ -0.06
Trim34aQ99PP6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim34aQ99PP6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Gm9192-201ENSMUST00000183221 985 ntBASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Gm9136-201ENSMUST00000193368 454 ntBASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim34aQ99PP6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms