Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm14219-201ENSMUST00000120414 288 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm8531-201ENSMUST00000188319 893 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm44158-201ENSMUST00000203881 505 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm45120-201ENSMUST00000208880 408 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdac9Q99N13 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.02□□□□□ -0.16
Hdac9Q99N13 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdac9Q99N13 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm9089-201ENSMUST00000122027 526 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm9136-201ENSMUST00000193368 454 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm7940-201ENSMUST00000218195 769 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm5451-201ENSMUST00000080545 579 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.02□□□□□ -0.17
Hdac9Q99N13 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac9Q99N13 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac9Q99N13 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms