Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm11425-201ENSMUST00000119608 498 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm25043-201ENSMUST00000158604 212 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm9396-201ENSMUST00000076703 567 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkd1Q99MH6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.22□□□□□ -0.61
Nkd1Q99MH6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkd1Q99MH6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkd1Q99MH6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms