Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm37458-201ENSMUST00000194055 410 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Mt1-202ENSMUST00000211807 1085 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm19640-201ENSMUST00000214849 464 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Pck2-205ENSMUST00000226352 2784 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx6-1Q99MA9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm12948-201ENSMUST00000119406 682 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm14942-201ENSMUST00000119642 336 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm14760-201ENSMUST00000121831 999 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm4862-201ENSMUST00000170405 438 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm42779-201ENSMUST00000198807 406 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm43852-201ENSMUST00000202098 917 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm44506-201ENSMUST00000206278 965 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gm23680-201ENSMUST00000083162 164 ntBASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx6-1Q99MA9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms