Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm19994-201ENSMUST00000217086 586 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Gm807-202ENSMUST00000224929 408 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Scrt1Q99M85 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.5□□□□□ -0.73
Scrt1Q99M85 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scrt1Q99M85 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm4726-201ENSMUST00000135604 736 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm6019-201ENSMUST00000148369 736 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm10774-201ENSMUST00000188689 204 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.49□□□□□ -0.73
Scrt1Q99M85 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Scrt1Q99M85 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Scrt1Q99M85 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms