Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdk5rap3Q99LM2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gm43118-201ENSMUST00000199149 775 ntBASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdk5rap3Q99LM2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm25214-201ENSMUST00000104573 129 ntBASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm5187-201ENSMUST00000117317 991 ntBASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm38002-201ENSMUST00000193255 180 ntBASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdk5rap3Q99LM2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cdk5rap3Q99LM2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.33□□□□□ -0.43
Cdk5rap3Q99LM2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdk5rap3Q99LM2 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.33□□□□□ -0.43
Cdk5rap3Q99LM2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms