Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.69□□□□□ -0.06
RtcbQ99LF4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RtcbQ99LF4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm14274-201ENSMUST00000117182 615 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm11979-201ENSMUST00000119629 743 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm9192-201ENSMUST00000183221 985 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm30671-201ENSMUST00000214898 318 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.68□□□□□ -0.06
RtcbQ99LF4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.68□□□□□ -0.06
RtcbQ99LF4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.67□□□□□ -0.06
RtcbQ99LF4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm43380-201ENSMUST00000200421 220 ntBASIC14.67□□□□□ -0.06
RtcbQ99LF4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.67□□□□□ -0.06
RtcbQ99LF4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.67□□□□□ -0.06
RtcbQ99LF4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RtcbQ99LF4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.66□□□□□ -0.06
RtcbQ99LF4 Gm7082-201ENSMUST00000209880 969 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms