Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdk9Q99J95 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm11597-201ENSMUST00000121423 964 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm22331-201ENSMUST00000158066 136 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Mir7085-201ENSMUST00000184353 66 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.01□□□□□ -0.49
Cdk9Q99J95 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdk9Q99J95 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12□□□□□ -0.49
Cdk9Q99J95 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cdk9Q99J95 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Cdk9Q99J95 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Gm40377-201ENSMUST00000204604 2015 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk9Q99J95 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk9Q99J95 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cdk9Q99J95 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Mir1982-201ENSMUST00000157368 74 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms