Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdha3Q91Y16 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm2260-201ENSMUST00000184965 657 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm44262-201ENSMUST00000204969 372 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm45224-201ENSMUST00000208203 414 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm45433-201ENSMUST00000209386 247 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm5363-201ENSMUST00000211927 938 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.5□□□□□ -0.41
Pcdha3Q91Y16 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm29615-201ENSMUST00000185371 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28224-201ENSMUST00000186078 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm29001-201ENSMUST00000186177 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28292-201ENSMUST00000186593 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28101-201ENSMUST00000187608 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm29076-201ENSMUST00000187689 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28302-201ENSMUST00000187931 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28646-201ENSMUST00000188220 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28205-201ENSMUST00000189177 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm29032-201ENSMUST00000189797 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm28695-201ENSMUST00000190300 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm37448-201ENSMUST00000192795 697 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 AY036118-201ENSMUST00000200021 923 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm43962-201ENSMUST00000203898 190 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm45186-201ENSMUST00000206874 478 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms