Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rprd1aQ8VDS4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm7857-201ENSMUST00000117957 358 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm12217-201ENSMUST00000118858 696 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm16570-201ENSMUST00000161951 436 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm43184-201ENSMUST00000197247 542 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm18893-201ENSMUST00000198416 943 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rprd1aQ8VDS4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm12266-201ENSMUST00000120311 962 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rprd1aQ8VDS4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms