Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm14441-201ENSMUST00000121960 540 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm27682-201ENSMUST00000183930 110 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nup35Q8R4R6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm14928-201ENSMUST00000120198 477 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm9002-201ENSMUST00000178437 499 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms