Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm14921-201ENSMUST00000118643 908 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm23699-201ENSMUST00000158835 135 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm19187-201ENSMUST00000206781 892 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm10179-201ENSMUST00000086233 688 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cuedc1Q8R3V6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm19459-201ENSMUST00000176240 835 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm29615-201ENSMUST00000185371 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28224-201ENSMUST00000186078 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm29001-201ENSMUST00000186177 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28292-201ENSMUST00000186593 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28101-201ENSMUST00000187608 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm29076-201ENSMUST00000187689 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28302-201ENSMUST00000187931 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28646-201ENSMUST00000188220 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28205-201ENSMUST00000189177 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm29032-201ENSMUST00000189797 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm28695-201ENSMUST00000190300 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm37448-201ENSMUST00000192795 697 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm7003-201ENSMUST00000195089 312 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm45598-202ENSMUST00000210719 986 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm6562-201ENSMUST00000221903 464 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.03□□□□□ -0.64
Cuedc1Q8R3V6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 174.4 ms