Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm26013-201ENSMUST00000104404 119 ntBASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm26047-201ENSMUST00000157308 113 ntBASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm26047-202ENSMUST00000198840 115 ntBASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp7Q8R1T1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm14942-201ENSMUST00000119642 336 ntBASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm9192-201ENSMUST00000183221 985 ntBASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm37028-201ENSMUST00000194276 107 ntBASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm37981-201ENSMUST00000194280 535 ntBASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp7Q8R1T1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Chmp7Q8R1T1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.21■□□□□ 0.02
Chmp7Q8R1T1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Chmp7Q8R1T1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm12036-201ENSMUST00000120008 530 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm11675-201ENSMUST00000121873 832 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm22442-201ENSMUST00000157256 144 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm9136-201ENSMUST00000193368 454 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms