Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.61□□□□□ -0.07
Sf3a1Q8K4Z5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Gm27341-201ENSMUST00000183570 106 ntBASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Gm270-201ENSMUST00000223010 976 ntBASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sf3a1Q8K4Z5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm14028-201ENSMUST00000117434 479 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm15004-201ENSMUST00000119192 630 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm14277-201ENSMUST00000121195 360 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm8343-201ENSMUST00000182705 994 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm18038-201ENSMUST00000197900 485 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm4157-201ENSMUST00000211647 679 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gm5705-201ENSMUST00000066241 711 ntBASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3a1Q8K4Z5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3a1Q8K4Z5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3a1Q8K4Z5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.58□□□□□ -0.08
Sf3a1Q8K4Z5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms