Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm11930-201ENSMUST00000117788 190 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm31256-201ENSMUST00000194705 506 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm21769-201ENSMUST00000211922 111 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm10478-201ENSMUST00000084451 396 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cchcr1Q8K2I2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cchcr1Q8K2I2 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Gm27501-201ENSMUST00000183599 107 ntBASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cchcr1Q8K2I2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm23270-201ENSMUST00000104055 131 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm13392-201ENSMUST00000117708 150 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm11511-201ENSMUST00000118146 540 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms