Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Gm15808-201ENSMUST00000119046 604 ntBASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rfwd3Q8CIK8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm45224-201ENSMUST00000208203 414 ntBASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms