Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rbm28Q8CGC6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm24891-201ENSMUST00000104391 136 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm12857-201ENSMUST00000117678 592 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm14724-201ENSMUST00000118400 537 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm14247-201ENSMUST00000120950 237 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm10051-201ENSMUST00000145209 414 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm8100-201ENSMUST00000182906 988 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm27530-201ENSMUST00000184096 98 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm2965-201ENSMUST00000198365 343 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm45770-201ENSMUST00000212105 616 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.09□□□□□ -0.15
Rbm28Q8CGC6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Gm3508-201ENSMUST00000186012 792 ntBASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Gm37246-201ENSMUST00000192665 835 ntBASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rbm28Q8CGC6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rbm28Q8CGC6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms