Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm12015-201ENSMUST00000117065 843 ntBASIC10.61□□□□□ -0.71
ShfQ8CG80 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm13786-201ENSMUST00000122371 333 ntBASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
ShfQ8CG80 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm6013-201ENSMUST00000212264 699 ntBASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm19309-201ENSMUST00000218295 205 ntBASIC10.61□□□□□ -0.71
ShfQ8CG80 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.61□□□□□ -0.71
ShfQ8CG80 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
ShfQ8CG80 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ShfQ8CG80 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm11989-201ENSMUST00000117240 672 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm11362-201ENSMUST00000118838 850 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm15824-201ENSMUST00000119516 955 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm11793-201ENSMUST00000120433 981 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm11424-201ENSMUST00000121929 829 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.6□□□□□ -0.71
ShfQ8CG80 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.6□□□□□ -0.71
ShfQ8CG80 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ShfQ8CG80 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ShfQ8CG80 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms