Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28aQ8CEI3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.54□□□□□ -0.4
Ccdc28aQ8CEI3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc28aQ8CEI3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc28aQ8CEI3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms