Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.09□□□□□ -0.15
Nup88Q8CEC0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.09□□□□□ -0.15
Nup88Q8CEC0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup88Q8CEC0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup88Q8CEC0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm12314-201ENSMUST00000118104 538 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm22902-201ENSMUST00000158488 302 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm28882-201ENSMUST00000185504 314 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup88Q8CEC0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm23200-201ENSMUST00000104379 132 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Gm5070-201ENSMUST00000177599 862 ntBASIC14.07□□□□□ -0.16
Nup88Q8CEC0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms