Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Gm8531-201ENSMUST00000188319 893 ntBASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Gm19009-201ENSMUST00000223072 823 ntBASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim52Q8CDV4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm12247-201ENSMUST00000117585 670 ntBASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim52Q8CDV4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm25766-201ENSMUST00000104101 131 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm11628-201ENSMUST00000117568 171 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm20495-201ENSMUST00000173902 235 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Mir6958-201ENSMUST00000184207 73 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm28324-201ENSMUST00000187913 264 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim52Q8CDV4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms