Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Mir7677-201ENSMUST00000184226 67 ntBASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Gm6450-201ENSMUST00000200896 574 ntBASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Gm807-202ENSMUST00000224929 408 ntBASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atg4aQ8C9S8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm28937-201ENSMUST00000185413 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm29400-201ENSMUST00000187208 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm28686-201ENSMUST00000187404 609 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm28662-201ENSMUST00000188446 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm28251-201ENSMUST00000188835 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm37318-201ENSMUST00000194325 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm38017-201ENSMUST00000194768 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm37287-201ENSMUST00000195449 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm37793-201ENSMUST00000195548 695 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4aQ8C9S8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm12857-201ENSMUST00000117678 592 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm11439-201ENSMUST00000118598 409 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm27552-201ENSMUST00000183351 62 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm27341-201ENSMUST00000183570 106 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm27844-201ENSMUST00000183613 62 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm18056-201ENSMUST00000207670 568 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm18061-201ENSMUST00000208350 562 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm18063-201ENSMUST00000208529 568 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Gm18052-201ENSMUST00000208750 559 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4aQ8C9S8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms