Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm4654-201ENSMUST00000183305 982 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Mir6923-201ENSMUST00000184592 72 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm25053-201ENSMUST00000103982 133 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm25922-201ENSMUST00000104281 130 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm14892-201ENSMUST00000117636 267 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm14395-201ENSMUST00000120494 563 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm5257-201ENSMUST00000121823 790 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm24679-201ENSMUST00000158762 111 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm26989-201ENSMUST00000182608 749 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm25053-202ENSMUST00000199731 132 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm39288-201ENSMUST00000210554 446 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm2553-201ENSMUST00000215986 605 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Col6a6Q8C6K9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm24398-201ENSMUST00000157870 109 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm34379-201ENSMUST00000195036 290 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm5451-201ENSMUST00000080545 579 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm26035-201ENSMUST00000083065 308 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms