Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm22133-201ENSMUST00000102082 109 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm26361-201ENSMUST00000158868 186 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm17812-201ENSMUST00000204935 318 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trub1Q8C0D0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trub1Q8C0D0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm13996-201ENSMUST00000118456 430 ntBASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm8913-201ENSMUST00000209491 641 ntBASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Gm5705-201ENSMUST00000066241 711 ntBASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trub1Q8C0D0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms