Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm11956-201ENSMUST00000119525 512 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm4726-201ENSMUST00000135604 736 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm6019-201ENSMUST00000148369 736 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Gm6108-201ENSMUST00000208365 367 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.76■□□□□ 0.27
Usp47Q8BY87 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp47Q8BY87 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Ptprm-203ENSMUST00000224091 3773 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Zfp125-201ENSMUST00000079237 2488 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12616-201ENSMUST00000118594 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm11836-201ENSMUST00000121022 441 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12624-201ENSMUST00000177615 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12621-201ENSMUST00000177760 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12615-201ENSMUST00000177970 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12622-201ENSMUST00000177975 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12627-201ENSMUST00000178412 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12625-201ENSMUST00000179122 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12614-201ENSMUST00000179586 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm12613-201ENSMUST00000180323 382 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm5051-201ENSMUST00000204085 485 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm44506-201ENSMUST00000206278 965 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Gm4978-201ENSMUST00000071565 801 ntBASIC16.75■□□□□ 0.27
Usp47Q8BY87 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Usp47Q8BY87 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm18198-201ENSMUST00000204986 1551 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm38194-201ENSMUST00000194529 2211 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm11700-201ENSMUST00000119409 403 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm15782-201ENSMUST00000121073 445 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Gm43186-201ENSMUST00000198130 824 ntBASIC16.74■□□□□ 0.27
Usp47Q8BY87 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp47Q8BY87 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.73■□□□□ 0.27
Usp47Q8BY87 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Gm10179-201ENSMUST00000086233 688 ntBASIC16.73■□□□□ 0.27
Usp47Q8BY87 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp47Q8BY87 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp47Q8BY87 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp47Q8BY87 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp47Q8BY87 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp47Q8BY87 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms