Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm14726-201ENSMUST00000120623 896 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm20482-202ENSMUST00000174729 825 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm27023-201ENSMUST00000182372 285 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gm13570-201ENSMUST00000140763 309 ntBASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gm27320-201ENSMUST00000184892 109 ntBASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trerf1Q8BXJ2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Btrc-209ENSMUST00000224478 2194 ntBASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms