Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm43133-201ENSMUST00000197472 463 ntBASIC10.52□□□□□ -0.73
SprnQ8BWU1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.52□□□□□ -0.73
SprnQ8BWU1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SprnQ8BWU1 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Rprl1-201ENSMUST00000158050 327 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm43822-201ENSMUST00000200285 476 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm807-202ENSMUST00000224929 408 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.51□□□□□ -0.73
SprnQ8BWU1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SprnQ8BWU1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SprnQ8BWU1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms