Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc30Q8BVF4 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.37■□□□□ 0.05
Ccdc30Q8BVF4 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Gm15808-201ENSMUST00000119046 604 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Gm43075-201ENSMUST00000198613 3905 ntBASIC15.36■□□□□ 0.05
Ccdc30Q8BVF4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Gm270-201ENSMUST00000223010 976 ntBASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc30Q8BVF4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Gm43184-201ENSMUST00000197247 542 ntBASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc30Q8BVF4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc30Q8BVF4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc30Q8BVF4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms