Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gm24891-201ENSMUST00000104391 136 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gm7851-201ENSMUST00000117574 323 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gm15207-201ENSMUST00000119259 442 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 B9d1os-201ENSMUST00000137010 674 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Mir5132-201ENSMUST00000175166 71 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nup54Q8BTS4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm11941-201ENSMUST00000119904 610 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm12566-201ENSMUST00000121479 359 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm18827-201ENSMUST00000188341 790 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm45575-201ENSMUST00000210283 548 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nup54Q8BTS4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms