Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm9369-201ENSMUST00000196009 733 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Trav11n-201ENSMUST00000200113 343 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm15196-201ENSMUST00000121406 482 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm25226-201ENSMUST00000158198 123 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm25830-201ENSMUST00000158923 132 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Olfr692-202ENSMUST00000217827 1126 ntBASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col16a1Q8BLX7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Mir181d-201ENSMUST00000102383 72 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm8111-201ENSMUST00000117659 987 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm12389-201ENSMUST00000117696 418 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm11700-201ENSMUST00000119409 403 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm14234-201ENSMUST00000119539 845 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm9166-201ENSMUST00000120293 561 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm13284-201ENSMUST00000121020 547 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms