Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Rprl1-201ENSMUST00000158050 327 ntBASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Rprl1-202ENSMUST00000198476 238 ntBASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Depdc1bQ8BH88 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm12015-201ENSMUST00000117065 843 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm13296-201ENSMUST00000117854 997 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm12036-201ENSMUST00000120008 530 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm44262-201ENSMUST00000204969 372 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Depdc1bQ8BH88 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm13996-201ENSMUST00000118456 430 ntBASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Gm8385-201ENSMUST00000058999 643 ntBASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Depdc1bQ8BH88 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms