Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Slc5a7Q8BGY9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc5a7Q8BGY9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm5781-201ENSMUST00000219792 443 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm807-202ENSMUST00000224929 408 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm10254-201ENSMUST00000052888 867 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc5a7Q8BGY9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.75
Slc5a7Q8BGY9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc5a7Q8BGY9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc5a7Q8BGY9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc5a7Q8BGY9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms